Confluence Retirement

In an effort to consolidate USGS hosted Wikis, the myUSGS Confluence service is targeted for retirement on January 28, 2022. The official USGS Wiki and collaboration space is now SharePoint. Please migrate existing spaces and content to the SharePoint platform and remove it from Confluence at your earliest convenience. If you need any additional information or have any concerns about this change, please contact myusgs@usgs.gov. Thank you for your prompt attention to this matter.
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  • 2018 ScienceBase Release Notes
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ScienceBase Version December Released 2018-12-26

Bug
* [SCIENCEBASE-7723] - Unable to download Large file
* [SCIENCEBASE-7724] - Unable to update/import USGS records in directory
* [SCIENCEBASE-7739] - Fix uploads in latest deploy of SB Files
* [SCIENCEBASE-7744] - Incorrect FGDC to SB translation (on NPG harvested Items)


Task

* [SCIENCEBASE-7640] - GraphQL: Produce better error messages
* [SCIENCEBASE-7674] - files-service: Attach an ACL to a folder
* [SCIENCEBASE-7692] - FQA: Test: SCIENCEBASE-7635: As a user I can upload files to a specific directory
* [SCIENCEBASE-7706] - Deploy files-db-api to dev-api.sciencebase.gov pointed at the RDS
* [SCIENCEBASE-7716] - Wire frame for files column layout Routes
* [SCIENCEBASE-7717] - POC python function to extract shapefile metadata
* [SCIENCEBASE-7718] - UI: Display file metadata
* [SCIENCEBASE-7721] - UI: Improve Files Detail Page and Add New Metadata
* [SCIENCEBASE-7722] - Setup dev environment
* [SCIENCEBASE-7725] - Add test harness to files-api
* [SCIENCEBASE-7729] - GraphQL: Query/Cache roles from directory after user authentication
* [SCIENCEBASE-7730] - GraphQL: Role lookup query
* [SCIENCEBASE-7735] - FQA Test SCIENCEBASE-7712 ScienceBase - Password Reset in IE is not working in Directory
* [SCIENCEBASE-7743] - POC python function to extract metadata from a Geotiff
* [SCIENCEBASE-7745] - UUID for File
* [SCIENCEBASE-7748] - Wire frame Navigation Panel quota
* [SCIENCEBASE-7749] - Wire frame Navigation panel content context
* [SCIENCEBASE-7751] - Profile component
* [SCIENCEBASE-7752] - Files Navigation Panel
* [SCIENCEBASE-7763] - Wireframe toaster
* [SCIENCEBASE-7766] - Standardize the deploy process for the files components
* [SCIENCEBASE-7767] - Place updated *.staging.sciencebase.gov cert into k8s
* [SCIENCEBASE-7768] - Make Redis connection more stable
* [SCIENCEBASE-7775] - FQATEST-SCIENCEBASE-7751-Profile component
* [SCIENCEBASE-7776] - FQA TEST-SCIENCEBASE-7752-Files Navigation Panel
* [SCIENCEBASE-7778] - Content table header component
* [SCIENCEBASE-7779] - catalog files from s3 object created events
* [SCIENCEBASE-7780] - files-service: File-Metadata REST services
* [SCIENCEBASE-7781] - Create 2 Test Buckets on S3 for Black Pearl Testing

Improvement
* [SCIENCEBASE-7771] - Replace Old Version of User's S3 Files on AWS with Correct Version

ScienceBase Version November Released 2018-11-30

Sub-task

* [SCIENCEBASE-7545] - Create prod SB elasticsearch copy of public items in Prod-IS
* [SCIENCEBASE-7546] - Deploy sbSearch service to Prod-IS
* [SCIENCEBASE-7547] - Deploy sbSearch UI to Prod-IS

Bug
* [SCIENCEBASE-7699] - Duplicate Key exception when creating folders on file creation request


Story
* [SCIENCEBASE-7544] - Deploy SB3 Search to sciencebase.usgs.gov

Task
* [SCIENCEBASE-7496] - Type files triggered by file receive event
* [SCIENCEBASE-7622] - Deploy files-ui to Dev-IS beta
* [SCIENCEBASE-7630] - Front-end: Identify files that are approved for download
* [SCIENCEBASE-7633] - Back-end API: Provide download URLs
* [SCIENCEBASE-7652] - Front-end: Set up route to load file details at a permanent URL
* [SCIENCEBASE-7675] - Tech talk on Permission Structure for folders/community
* [SCIENCEBASE-7696] - FQA: Test: SCIENCEBASE-7683: S3 download Error when user is not on the DOI network
* [SCIENCEBASE-7698] - Deploy SB Files to a staging Url
* [SCIENCEBASE-7700] - Bucket management in files-ui/api
* [SCIENCEBASE-7705] - Bucket management in files-ui/api
* [SCIENCEBASE-7708] - Design: Permission Structure for folders/community
* [SCIENCEBASE-7709] - Switch node projects to npm with .npmrc
* [SCIENCEBASE-7710] - Create tests for files-ui components
* [SCIENCEBASE-7733] - catalog files from s3 object created events

Improvement
* [SCIENCEBASE-7680] - Audit logging for SB Files DB API
* [SCIENCEBASE-7681] - Database migration (SQL install/deploy process) for files-db-api
* [SCIENCEBASE-7682] - files-db-api - add support for multiple Buckets, refactor keys
* [SCIENCEBASE-7695] - fix breadcrumbs for folders and root directory


ScienceBase Version 2.160.0 Released 2018-11-26


Bug
* [SCIENCEBASE-7683] - S3 download Error when user is not on the DOI network
* [SCIENCEBASE-7694] - Investigate ScienceBase OAIPMH feed
* [SCIENCEBASE-7702] - NDC Dashboard Exhibiting Errors
* [SCIENCEBASE-7704] - 'Download as zip' not Working for Shapefile Facet
* [SCIENCEBASE-7712] - ScienceBase - Password Reset in IE is not working in Directory
* [SCIENCEBASE-7713] - Large Files Not Downloading Properly from ScienceBase Item

ScienceBase Version October Released 2018-10-31

Bug
* [SCIENCEBASE-7615] - BASIS+ Footprint Shows a Blank Box instead of ScienceBase Login for Some Users
* [SCIENCEBASE-7649] - When using "+ Add S3 files..." store location is incorrect when there is an extension
* [SCIENCEBASE-7661] - Directory/myUSGS not Connecting - JOSSO Unexpected error adding non-DOI user
* [SCIENCEBASE-7662] - Beta - my-beta.usgs.gov - Error when logging in
* [SCIENCEBASE-7663] - Metadata Harvest Option Not Working on Item



Story
* [SCIENCEBASE-7635] - As a user I can upload files to a specific directory

Task
* [SCIENCEBASE-7628] - Front end UI: User can upload a shapefile and see shapefile metadata
* [SCIENCEBASE-7631] - Front-end: On the file info page show the approval metadata
* [SCIENCEBASE-7632] - Back-end API: Provide approval metadata (FileStatus) for files
* [SCIENCEBASE-7636] - Back End: CRUD rest API service for creating new folders
* [SCIENCEBASE-7637] - Front End: Browsing and adding files by folder
* [SCIENCEBASE-7638] - Front End: Add a "Add" button to the directories for adding files
* [SCIENCEBASE-7639] - Back-end: Add upload_session and SB Files uuid metadata to S3PutObject requests
* [SCIENCEBASE-7646] - Deploy SB 2.159.0
* [SCIENCEBASE-7654] - Show files after they have been uploaded
* [SCIENCEBASE-7656] - Add to AWS Access keys
* [SCIENCEBASE-7657] - Back End: plumb the API Service for creating new folders in S3 with graphql
* [SCIENCEBASE-7660] - Point prod search-UI at ScienceBase search instead of service
* [SCIENCEBASE-7664] - Back-end: Add upload_session and SB Files uuid metadata to S3PutObject requests
* [SCIENCEBASE-7665] - Back End: Browsing and adding files by folder
* [SCIENCEBASE-7677] - Investigate the Elastic issue related to the SB problems on 10/22
* [SCIENCEBASE-7678] - Troubleshoot elasticsearch issues (2018-10-26)
* [SCIENCEBASE-7688] - Back-end API: Provide download URLs
* [SCIENCEBASE-7689] - Front-end: Set up route to load file details at a permanent URL
* [SCIENCEBASE-7690] - catalog files from s3 object created events
* [SCIENCEBASE-7691] - Type files triggered by file receive event

ScienceBase Version 2.159.0 Released 2018-10-03

Bug
* [SCIENCEBASE-7319] - When using "Add Black Pearl files..." store location is incorrect when there is an extension
* [SCIENCEBASE-7530] - Incorrectly linking an S3 file to an item causes incorrect JSON
* [SCIENCEBASE-7648] - Unable to add a S3 file to a New Item that has not been saved


New Feature
* [SCIENCEBASE-7039] - Add a captcha to the s3 download page


Task
* [SCIENCEBASE-7556] - Add the Files Upload app to the Catalog Status Page


ScienceBase Version September Released 2018-09-30

Bug
* [SCIENCEBASE-7611] - advanced search - fix issue with sort method/order overriding each other
* [SCIENCEBASE-7613] - Files: S3 Amazon storage: If outside the DOI network you recive and Error 
* [SCIENCEBASE-7617] - User Unable to Log Into ScienceBase
* [SCIENCEBASE-7624] - troubleshoot orcid script 
* [SCIENCEBASE-7643] - New SB3 UI - As a SB user not logged in/logged in I am not able to perform an Advanced search in IE 
* [SCIENCEBASE-7644] - New SB3 UI - Advanced Search - Enter key after entering query creates page not found


New Feature

* [SCIENCEBASE-7558] - Add the ability to search by ORCID in the S3 Advanced Search form
* [SCIENCEBASE-7559] - Add the Ability to Search for USGS Data Release the S3 Advanced Search Form
* [SCIENCEBASE-7610] - Parse weblinks from the FGDC metextns/onlink section


Story
* [SCIENCEBASE-7609] - NGTOC Metadata Needs (Scrape & Display Info from Metadata Extension)


Task
* [SCIENCEBASE-7430] - Change ItemFile model so download URIs work via IDs/UUIDs
* [SCIENCEBASE-7446] - Search Service: Gitlab CI Testing, Alpha Deployment, Faster Beta deployment, etc
* [SCIENCEBASE-7452] - Refactor Search criteria model
* [SCIENCEBASE-7519] - Deploy files-api to dev-is
* [SCIENCEBASE-7550] - Add Search by Geometry to S3 Advanced Search 
* [SCIENCEBASE-7551] - Add Search by place to S3 Advanced Search
* [SCIENCEBASE-7553] - Add Operators to the searches in the Advanced Search form
* [SCIENCEBASE-7569] - catalog files from s3 object created events
* [SCIENCEBASE-7573] - Design discussion for SB search model 
* [SCIENCEBASE-7574] - Design discussion for SB3 item model
* [SCIENCEBASE-7575] - Review the state of Search for SB3 and SageDAT
* [SCIENCEBASE-7579] - Prepare for GraphQL ARB review
* [SCIENCEBASE-7616] - Deploy SB 2.158.0
* [SCIENCEBASE-7619] - Move 87 files out of the Amethyst Vein System into its child item. 
* [SCIENCEBASE-7620] - Set up development environment for SB Files
* [SCIENCEBASE-7621] - Replace the hasura calls in files-api to hit the new grails-gorm api
* [SCIENCEBASE-7626] - Files UI-API-DB-API-deploy
* [SCIENCEBASE-7627] - Files UI-API-DB-API-deploy to staging
* [SCIENCEBASE-7650] - FQA: Testing: S3 download failing
* [SCIENCEBASE-7655] - Front end UI: User can upload a shapefile and see shapefile metadata
* [SCIENCEBASE-7658] - FQA: Test: SCIENCEBASE-7648: Unable to add a S3 file to a New Item that has not been saved

Improvement
* [SCIENCEBASE-7517] - SB3 - Advanced search - Date filter not working
* [SCIENCEBASE-7537] - Deploy process for (/etc/appconfig) configuration files for beta/prod services in the cloud.
* [SCIENCEBASE-7614] - Config setup for testing search-service with Gitlab CI (on kube)

ScienceBase Version 2.158.0 Released 2018-09-13

Bug
* [SCIENCEBASE-6335] - NPE with file downloads: Cannot get property 'fileName' on null object
* [SCIENCEBASE-7557] - Unable to add a Black Pearl file to a New Item that has not been saved
* [SCIENCEBASE-7567] - Bad bounding box in OGC facet gives incorrect error message
* [SCIENCEBASE-7618] - S3 download failing

Task
* [SCIENCEBASE-7429] - Implement batch updates to pySB script for ORCID updates

ScienceBase Version August Released 2018-08-31

Sub-task
* [SCIENCEBASE-7605] - Create prod SB elasticsearch copy of public items in Prod-IS
* [SCIENCEBASE-7606] - Deploy sbSearch service to Prod-IS
* [SCIENCEBASE-7607] - Deploy sbSearch UI to Prod-IS


Bug
* [SCIENCEBASE-7448] - Basis+ issue with subtasks as a child of the incorrect projectID
* [SCIENCEBASE-7479] - Full Index (without delete?) deletes index without configuring a new index
* [SCIENCEBASE-7497] - File processing is causing 429s and 400s and ignoring them
* [SCIENCEBASE-7566] - New search ui is not working in IE 11 or edge.
* [SCIENCEBASE-7568] - orcid keyword in elasticsearch index


New Feature

* [SCIENCEBASE-7541] - styling file list view (css-grid vs material-ui)
* [SCIENCEBASE-7542] - Create File View component
* [SCIENCEBASE-7565] - Deploy ScienceBase 2.157.0
* [SCIENCEBASE-7577] - create an AuthContext using react context api for files (pair)

Story
* [SCIENCEBASE-7563] - FQA: SCIENCEBASE-7531: s3-service is not monitored on catalog status page
* [SCIENCEBASE-7604] - Deploy SB3 Search to sciencebase.usgs.gov

Task
* [SCIENCEBASE-7425] - Add OIDC (Keycloak) authentication to files-api
* [SCIENCEBASE-7450] - Start Files UI
* [SCIENCEBASE-7451] - Whiteboard Files UI
* [SCIENCEBASE-7453] - Initial code review of new Advanced Search UI
* [SCIENCEBASE-7454] - Add lucene search capability on the New Advanced Search form
* [SCIENCEBASE-7455] - Add Max/Offset to New Advanced Search form
* [SCIENCEBASE-7491] - Deploy files-api to dev-is
* [SCIENCEBASE-7492] - Next Steps on SB3 home page
* [SCIENCEBASE-7493] - Make SB3 home page mobile responsive
* [SCIENCEBASE-7508] - Use sdkman for docker-grails image
* [SCIENCEBASE-7510] - Add caching for gitlab kubernetes runners
* [SCIENCEBASE-7520] - SB3_Advanced Search: type ahead for Contact and Tag is not working
* [SCIENCEBASE-7525] - Fix footer on SB Search UI
* [SCIENCEBASE-7526] - Add a Photo Collections powered by ScienceBase page
* [SCIENCEBASE-7527] - Whiteboard Files UI
* [SCIENCEBASE-7533] - Deploy NDC Dashboard version 2.x
* [SCIENCEBASE-7534] - Deploy ScienceBase 2.156.0
* [SCIENCEBASE-7535] - Add missing search features from current Advanced Search to new Search UI
* [SCIENCEBASE-7538] - Create File list view component
* [SCIENCEBASE-7539] - Create upload component
* [SCIENCEBASE-7548] - Filter My Files view by user_id
* [SCIENCEBASE-7549] - Set up underlying GraphQL-enabled PostgresDB
* [SCIENCEBASE-7554] - Generate presigned urls for uploads
* [SCIENCEBASE-7560] - MVP for upload progress reporting
* [SCIENCEBASE-7564] - Use the apollo cache for storing a users files
* [SCIENCEBASE-7602] - Deploy files-api to dev-is

Improvement
* [SCIENCEBASE-7521] - New SB3 home improvments
* [SCIENCEBASE-7536] - Use CloudWatch for Search Service (dev-api.sciencebase.gov) logs
* [SCIENCEBASE-7603] - SB3 - Advanced search - Date filter not working
* [SCIENCEBASE-7608] - Deploy process for (/etc/appconfig) configuration files for beta/prod services in the cloud.

ScienceBase Version 2.157.0 Released 2018-08-23


Bug
* [SCIENCEBASE-7532] - Turn off debug logging in production for s3-service


Improvement
* [SCIENCEBASE-7509] - Streamline the process for attaching a Black Pearl file to a ScienceBase item
* [SCIENCEBASE-7531] - s3-service is not monitored on catalog status page

ScienceBase Version 2.156.0 Released 08-09-2018

Bug
* [SCIENCEBASE-7436] - Trim of extra spaces on web links URI
* [SCIENCEBASE-7486] - prod-es4 down, other nodes overcompensating
* [SCIENCEBASE-7494] - error sorting tags in GSP taglib
* [SCIENCEBASE-7502] - Unexpected System Error when downloading file added from S3 bucket
* [SCIENCEBASE-7528] - Unable to download a file hosted on Cloud using the anonymous link token

Task
* [SCIENCEBASE-7499] - Test the new DOI API
* [SCIENCEBASE-7501] - Metrics: Change ordering on Repo Metrics
* [SCIENCEBASE-7523] - WRET SB Vocab Updates

ScienceBase Version July Released 2018-07-31

Story
* [SCIENCEBASE-7441] - As a SB stakeholder, I need to report on the SB System file metrics

Task
* [SCIENCEBASE-7398] - Review and modify files-api flask app to fit in with the current vision
* [SCIENCEBASE-7405] - Create Search Results Wireframe
* [SCIENCEBASE-7435] - Review and update pysb documentation
* [SCIENCEBASE-7445] - Search Service: Secure Item GET to prevent unauthorized access to items.
* [SCIENCEBASE-7449] - Handle token refresh and logout if expired in React apps like Search UI
* [SCIENCEBASE-7456] - Identify/Execute the Next Steps for new SB3 home
* [SCIENCEBASE-7471] - Advanced Search Cleanup
* [SCIENCEBASE-7475] - Attach Large File from Black Pearl Storage to ScienceBase Item
* [SCIENCEBASE-7476] - Update dev-is signer aws access credentials
* [SCIENCEBASE-7480] - Add new file model
* [SCIENCEBASE-7481] - Research ORM to the files-api (SQLAlchemy)
* [SCIENCEBASE-7482] - Add presigning of upload/download URLs to the files-api
* [SCIENCEBASE-7483] - Upgrade React and Refactor Auth to use Context
* [SCIENCEBASE-7484] - Restore/re-implement Gitlab CI/CD for running branches of search-ui for FQA testing before merging
* [SCIENCEBASE-7487] - Add file model to files API
* [SCIENCEBASE-7498] - Deploy files-api to dev-is
* [SCIENCEBASE-7507] - Implement batch updates to pySB script for ORCID updates
* [SCIENCEBASE-7518] - Search Service: Gitlab CI Testing, Alpha Deployment, Faster Beta deployment, etc

Improvement
* [SCIENCEBASE-7439] - Change Default Date Range to longer than 6 months

ScienceBase Version 2.154.0 Released 2018-07-20

Bug
[SCIENCEBASE-7438] - JavaScript errors when loading ScienceBase by the Numbers
[SCIENCEBASE-7470] - Receive Cannot get property 'files' on null object when attempting to upload a sd file

Task
[SCIENCEBASE-7474] - Metrics: Change ordering on Repo Metrics

Improvement
[SCIENCEBASE-7428] - Weblink attributes for new TNM HTMC download formats


ScienceBase Version 2.153.0 Released 2018-06-29

Bug
SCIENCEBASE-7437 - Unable to upload a file from the extension tab

ScienceBase Version 2.152.0 Released 2018-06-14

Bug
[SCIENCEBASE-7420] - Item Hidden Properties remain after Item has been deleted (and shouldn't)

Task
[SCIENCEBASE-7395] - Complete search deploy in cloud
[SCIENCEBASE-7399] - Document plan for upgrading SB2 to work with the latest files API and uploader
[SCIENCEBASE-7402] - Add ORCID Search filter to advanced SB3 search form
[SCIENCEBASE-7403] - Implement rule for ORCID import from AD
[SCIENCEBASE-7404] - Script to update Contact's name with ORCID on existing SB items
[SCIENCEBASE-7412] - Deploy 2.151.0
[SCIENCEBASE-7415] - Add links to view audit json to SB for UX
[SCIENCEBASE-7419] - Add monitoring for metrics
[SCIENCEBASE-7421] - Default to have the rich text enabled on body when editing item

Improvement
[SCIENCEBASE-7393] - Add the Ability to Query ScienceBase by IPDS#
[SCIENCEBASE-7411] - Clean up SD service refresh
[SCIENCEBASE-7416] - Add link to large file uploader in file tab
[SCIENCEBASE-7417] - Pass an error/message on files > 50MB when using PySB replace_file method



ScienceBase Version 2.151.0 Released 2018-06-01

Bug
[SCIENCEBASE-4302] - Incorrect permissions on directory parties
[SCIENCEBASE-6472] - URISyntaxException in DOI code
[SCIENCEBASE-7118] - Directory: Querys for People, Parties and Org Text and logo needs fixed
[SCIENCEBASE-7397] - auto-complete is not working on manage permissions
[SCIENCEBASE-7414] - auto-complete is not working on manage permissions

New Feature
[SCIENCEBASE-7396] - create script to fix/update permissions for parties in directory

Task
[SCIENCEBASE-7078] - Determine if readme files in Gitlab are updated to help Systems team support SB team
[SCIENCEBASE-7391] - Add orcId to the elastic index config.
[SCIENCEBASE-7406] - ArcGIS Service process hanging
[SCIENCEBASE-7413] - Python Functional test is failing

Improvement
[SCIENCEBASE-6215] - Add in 'Import Contact by ID' feature to PySB
[SCIENCEBASE-7392] - 'Data Release' Category Type is Being Dropped When Refining Search Results
[SCIENCEBASE-7394] - Don't display contact details on catalogParty view page if private flag is enabled in directory

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